I love to see how information technology can help solve scientific problems efficiently.

Education

• Ph.D. in Bioengineering, Seoul National University, South Korea
  • Dissertation: A Study on Genetic Implications of Korean Individuals through the Establishment of Genome Dataset
  • Advisor: Jinwook Choi, M.D. Ph.D. & Murim Choi, Ph.D.
• M.S. in Bioengineering, Seoul National University, South Korea
  • Dissertation: Extracting biomarker information from pathology reports using natural language processing
  • Advisor: Jinwook Choi, M.D. Ph.D.
• B.S. in Media Communications Engineering (Electrical Engineering) with an honor of summa cum laude

Research Experience

• Postdoctoral Researcher (2023-present)
  • Institution: Biomedical Research Institute, Seoul National University Hospital
  • Advisor: Soo Heon Kwak, M.D. Ph.D.

Skills

• Computing languages: Python, Java, R, Perl, Bash shell scripting, MySQL, Snakemake, Workflow managment language (WDL)
• Bioinformatics: Hail, pipeline management for NGS data analysis (e.g. variant calling, DEG, sc-eQTL ..)
• Technologies: Amazon cloud computing, Google Cloud Platform, Docker, Apache spark, Git
• Laboratory skills: Sanger sequencing from saliva sample